PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.T09KF
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CO-like
Protein Properties Length: 353aa    MW: 39307.5 Da    PI: 4.9874
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.T09KFgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box21.74.1e-07444337
     zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                 e++C+ ++  ++  +C++++  lC +C  + H++      H
  Araip.T09KF  4 EPICEFCGVVRAVVYCKSDSARLCLNCDASVHSSnplssrH 44
                 689******99*********************766666666 PP
2CCT53.11.2e-18296338143
          CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 
                  R++a++RY+eK+kt  F K+irY+sRKa+Ae R+ vKGrFvk 
  Araip.T09KF 296 RAKAKMRYNEKKKTQMFGKQIRYASRKARAEARKQVKGRFVKT 338
                  8999*************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003368.0E-11249IPR000315B-box-type zinc finger
CDDcd000211.23E-5549No hitNo description
PROSITE profilePS501199.115649IPR000315B-box-type zinc finger
PROSITE profilePS5101713.523296338IPR010402CCT domain
PfamPF062031.5E-13296338IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MIMEPICEFC GVVRAVVYCK SDSARLCLNC DASVHSSNPL SSRHARSLLC DLCYCQAAVV  60
CCVDHNMCVC EACEWNQNEC LLRGHGRLLL KFYTGCPSFE DLSRLWSFVF DANSSCGGGG  120
GLEPISTLCV ERPDNDDGLF DLVSDKLTEI QPCFKFEPWT DLSPMIPSNQ DTMQFCKDQA  180
LFSPPESNQP KGCSNFNYLG IDEGNGLCPS ADSIEASSSV QQDFVTFQSP SMTPTFHSNV  240
NCALVSPIYN RDMNLGFPQG QVHSSISMEL SSIAGDSSVT DLDCELSNEI QCPQRRAKAK  300
MRYNEKKKTQ MFGKQIRYAS RKARAEARKQ VKGRFVKTGE EYDYDSLLQN KLE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.T09KF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016167887.20.0putative zinc finger protein CONSTANS-LIKE 11
TrEMBLA0A444Y6S40.0A0A444Y6S4_ARAHY; Uncharacterized protein
STRINGGLYMA12G32221.21e-121(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF70521923
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21880.11e-60B-box type zinc finger protein with CCT domain