PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.T09RD
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family LFY
Protein Properties Length: 424aa    MW: 47539.4 Da    PI: 6.4218
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.T09RDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY636.54.2e-19414011385
      FLO_LFY   1 mdp.eafsaslfkwdpraaaaapp.......arlleeaavseap...leaaaaaaark.lreleelfkayGvryltvakiaelGftvstLvdmkdeel 86 
                  mdp +af++slfkwdpr++  +pp        ++l  +++++ +   ++++    +r  l +leelf+ayG+ry+t+ak+aelGftv tL+dmkd+e+
  Araip.T09RD   1 MDPaDAFTTSLFKWDPRTVLPPPPssatrppPQILDYTVAPP-AvspSSVSFPPPKRPdLGGLEELFQAYGIRYYTAAKMAELGFTVRTLIDMKDDEI 97 
                  666256***********9996655333222222222222222.122222222222222366************************************* PP

      FLO_LFY  87 ddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet.aldalsqeglseepvqeekeaagsggeglgeaelvaaeekksee 183
                  dd+m+sls+ifr+dllvGeryG+kaavraerrrleeee  k+r+ l ++d++t aldalsqeglseepvq+ekeaagsgg++  ++e+v+  e+++++
  Araip.T09RD  98 DDMMNSLSQIFRWDLLVGERYGVKAAVRAERRRLEEEELIKRRNFLCTTDTTTnALDALSQEGLSEEPVQQEKEAAGSGGGS--TWEVVGGGEERRKQ 193
                  **************************************8888888878877666************************9998..89999887643333 PP

      FLO_LFY 184 ekkkaskk...kqkrkkkkelkse.......ededee.eeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkia 270
                   +++++++   k ++k +     +       e+e+ e ee+d  e ++g +g erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+ia
  Araip.T09RD 194 VQQERRRRrsnKINNKGS-----NrsnnedgEEEELEgEENDMIEGSNGGSGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIA 286
                  222222220002222222.....122232322222220222333344777888********************************************* PP

      FLO_LFY 271 kerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiW 368
                  k+rGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLde+asn+lrr+fkergenvGawrqacykplvaiaarqgwdida+fnahprLsiW
  Araip.T09RD 287 KDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDASNELRRTFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIW 384
                  ************************************************************************************************** PP

      FLO_LFY 369 YvPtkLrqLChlerska 385
                  YvPtkLrqLCh+e ++a
  Araip.T09RD 385 YVPTKLRQLCHAESNNA 401
                  *************9886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF016986.4E-2011402IPR002910Floricaula/leafy protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010582Biological Processfloral meristem determinacy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0031490Molecular Functionchromatin DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MDPADAFTTS LFKWDPRTVL PPPPSSATRP PPQILDYTVA PPAVSPSSVS FPPPKRPDLG  60
GLEELFQAYG IRYYTAAKMA ELGFTVRTLI DMKDDEIDDM MNSLSQIFRW DLLVGERYGV  120
KAAVRAERRR LEEEELIKRR NFLCTTDTTT NALDALSQEG LSEEPVQQEK EAAGSGGGST  180
WEVVGGGEER RKQVQQERRR RRSNKINNKG SNRSNNEDGE EEELEGEEND MIEGSNGGSG  240
GERQREHPFI VTEPGEVARG KKNGLDYLFH LYEQCREFLI QVQAIAKDRG EKCPTKVTNQ  300
VFRYAKKAGA SYINKPKMRH YVHCYALHCL DEDASNELRR TFKERGENVG AWRQACYKPL  360
VAIAARQGWD IDAIFNAHPR LSIWYVPTKL RQLCHAESNN AAVVVAATVA VSTSVSSAVA  420
QLPF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2vy1_A1e-1112404202182PROTEIN LEAFY
2vy2_A1e-1112404202182PROTEIN LEAFY
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189201RRKQVQQERRRRR
Functional Description ? help Back to Top
Source Description
UniProtMay regulate indeterminacy during leaf and flower development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00095SELEXTransfer from AT5G61850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.T09RD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169153.10.0protein UNIFOLIATA
RefseqXP_025672113.10.0protein UNIFOLIATA-like
SwissprotO485590.0UNI_PEA; Protein UNIFOLIATA
TrEMBLA0A444XWL50.0A0A444XWL5_ARAHY; Uncharacterized protein
STRINGXP_004501760.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80333346
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-110floral meristem identity control protein LEAFY (LFY)