PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.T65W7

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 276aa MW: 32373.8 Da PI: 7.3947

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.T65W7	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.1	4.5e-21	107	195	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YAk+ GFsvrks+s+ +g++ ++ +vCs+eg+r e+ ++ +++ r+ ++et++gC kl+v + ++ w+v ++ eHnHel Araip.T65W7 107 KFYNSYAKTRGFSVRKSRSRIV--DGKVREKAYVCSREGYRLEKWNHmKNRVRELKPETKCGCMSKLHVFFDVvTESWVVRDFCDEHNHEL 195 6***************9998..999**********9998885667777899********99999**************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	8.8E-19	107	196	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence Send to blast
MEPQPLWFCS VYLVVKISEL GVFVNSEISI VILFENSMEA SNSQRHTSDQ NVHNISDYVD 60 EDATSDAVDM DQYRINSWKD IGKIDFSSLS MENICQLHFV DLILAFKFYN SYAKTRGFSV 120 RKSRSRIVDG KVREKAYVCS REGYRLEKWN HMKNRVRELK PETKCGCMSK LHVFFDVVTE 180 SWVVRDFCDE HNHELIIPKY VKSHHNLTEF VQHFQHCLSY MQHRKDLADF KSSTGQPVIQ 240 THFQKLERSL ATIYTRQIFY VVPFNAPQGQ HIEGNI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.T65W7

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020973035.1	1e-111	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445C5A8	1e-102	A0A445C5A8_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15947	4	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-11	FAR1-related sequence 5