PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.T66PS
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 264aa    MW: 30312.5 Da    PI: 4.9445
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.T66PSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.48.4e-121181763790
         FAR1  37 kegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  ++g+r+e+  +    + ++r++++e+r+gC+ak+ v+ +k +g+w +t +++ HnH++ 
  Araip.T66PS 118 RQGFRKERMCDgvevAYQKRKPKPENRCGCEAKMCVHVDKdSGRWIITYFQEVHNHKML 176
                  789999999989988899********************999***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.0E-9118176IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MRSEVEESEN YSKESVRAPD PIKGLHVDGE GSAVGEEGSE GFEGYEGFEA ESEIHDEFGD  60
GFYDNWEERV MDEIADLGCM NLKEITMEET KNLHFLDREI AFLFYNLYAK MNGFAARRQG  120
FRKERMCDGV EVAYQKRKPK PENRCGCEAK MCVHVDKDSG RWIITYFQEV HNHKMLEDTL  180
TFMLPGHKRM NLAANDQMNM MLKNGSFFKF LCMRMETLGI PCDHITAVFL HLDITEMPAS  240
VVLERWSKDA RSKGVVCACF CKSG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.T66PS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020963754.12e-98protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZKA21e-131A0A444ZKA2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2951522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.14e-10FAR1 family protein