PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.T80U6
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 135aa    MW: 15464.5 Da    PI: 8.0499
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.T80U6genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.18.3e-154696454
                 -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54
                 +++f++eq++ Le  Fe+++++  +++ +LA+ lgL+ rq ++WFqNr a+
  Araip.T80U6 46 KRRFSDEQIRSLECIFESESKLEPKKKIQLARDLGLQPRQGFIWFQNRWAR 96
                 568*********************************************776 PP
2HD-ZIP_I/II74.12.7e-2444103160
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlE 60 
                  e+krr+s+eq+++LE  Fe+e+kLep++K +lar+Lglqprq  +WFqnr AR+ + ++E
  Araip.T80U6  44 ENKRRFSDEQIRSLECIFESESKLEPKKKIQLARDLGLQPRQGFIWFQNRWARIWLVEME 103
                  58***************************************************9876666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.1E-143293IPR009057Homeodomain-like
SuperFamilySSF466898.13E-133596IPR009057Homeodomain-like
PROSITE profilePS5007113.11940100IPR001356Homeobox domain
SMARTSM003892.3E-943104IPR001356Homeobox domain
CDDcd000869.81E-104698No hitNo description
PfamPF000462.7E-124696IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MAYMMDGDDE YIQASKGKNV ESFTCSEVAL PQNKNAKKKK SKIENKRRFS DEQIRSLECI  60
FESESKLEPK KKIQLARDLG LQPRQGFIWF QNRWARIWLV EMEIAAVAEA EAERGASDSH  120
DAYSGCAKIM HSTSQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.T80U6
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016198641.13e-66homeobox-leucine zipper protein ATHB-12-like
TrEMBLA0A444ZKN05e-62A0A444ZKN0_ARAHY; Uncharacterized protein
STRINGXP_007136490.17e-36(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120052635
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.25e-22homeobox 7