PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.U1K2F

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

G2-like

Protein Properties

Length: 246aa MW: 28034.2 Da PI: 10.5028

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.U1K2F	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	84.7	9.3e-27	191	238	4	51
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 +rWtp+LH rFv+av++LGG+e+AtPk +l+lm++kgL ++hvkSHLQ Araip.U1K2F 191 MRWTPNLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLIITHVKSHLQ 238 89********************************************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR01557	3.3E-18	191	238	IPR006447	Myb domain, plants
SuperFamily	SSF46689	1.79E-10	191	239	IPR009057	Homeodomain-like
Pfam	PF00249	1.3E-6	191	238	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	5.4E-22	191	238	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence Send to blast
MTVRELGLSD TVLDSLAQCF SRNTSEIKRY ESPSNVLYML DMKLLVMKTM LLGIPRMEIP 60 KIFLKVKSLF WKRILKQLLT PLTIFFVDAV LFSIANYMDV PRILSSSLRS NLWNPLDTEH 120 EPCGLNCFKL VLKLGRFFNA TSSAQADVEE KCSGSSLSRK KSFAKRYLGE TGQHMLGSNV 180 LPVPSLMLTF MRWTPNLHLR FVHAVQRLGG QERATPKLVL QLMNIKGLII THVKSHLQEQ 240 EGRGHK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	8e-16	191	239	5	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	8e-16	191	239	5	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-15	191	239	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-15	191	239	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-15	191	239	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-15	191	239	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	8e-16	191	239	5	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	8e-16	191	239	5	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	8e-16	191	239	5	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	8e-16	191	239	5	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	8e-16	191	239	5	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	8e-16	191	239	5	53	Protein PHOSPHATE STARVATION RESPONSE 1

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.U1K2F

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A444XS07	1e-103	A0A444XS07_ARAHY; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-22	G2-like family protein