PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.UH8S4
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 134aa    MW: 15347.1 Da    PI: 7.4598
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.UH8S4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.22e-1651128177
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwe 77 
                  +fY+ ++k  GF vrk  s k   +g++++++f C+keg re+++ +  +++r +++etrt+Cka+l v ++k d++w+
  Araip.UH8S4  51 EFYRGFGKLHGFGVRKGDSGKD-CDGNVVRYRFFCNKEGLRERKHYDrVDRTRVHKPETRTNCKAMLSVYLDKnDKHWK 128
                  6*****************9998.8899***************99998556777799***************99788885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.7E-1451128IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MEVSLSEADG DCGGSDGDAN EVENSDLEDL GGLSVDDILK KVCHSIENAY EFYRGFGKLH  60
GFGVRKGDSG KDCDGNVVRY RFFCNKEGLR ERKHYDRVDR TRVHKPETRT NCKAMLSVYL  120
DKNDKHWKKL QRLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.UH8S4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016168015.11e-88protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025669841.11e-88protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Y6B43e-87A0A444Y6B4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15343210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-06FAR1 family protein