PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.UJR3L
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 189aa    MW: 21161.1 Da    PI: 8.929
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.UJR3LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.0014971123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C+ C++ Fs+   L  H  +H
  Araip.UJR3L 49 FECKTCNRKFSSFQALGGHRASH 71
                 89**********99999998887 PP
2zf-C2H213.10.0002899121123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++Cg  Fs    L  H+r+H
  Araip.UJR3L  99 HECSICGLKFSLGQALGGHMRKH 121
                  78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.194971IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.25E-849121No hitNo description
PROSITE profilePS5015710.6994976IPR007087Zinc finger, C2H2
PfamPF139129.3E-114973IPR007087Zinc finger, C2H2
PROSITE patternPS0002805171IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.606.0E-497123IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.09799126IPR007087Zinc finger, C2H2
SMARTSM003550.1299121IPR015880Zinc finger, C2H2-like
PfamPF139121.3E-899123IPR007087Zinc finger, C2H2
PROSITE patternPS000280101121IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0071289Biological Processcellular response to nickel ion
GO:2000280Biological Processregulation of root development
GO:0005634Cellular Componentnucleus
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MKRQRENEGY CSVESIDLVK CLMLLPLLQE RSNKSSTSSM HHRNGSAEFE CKTCNRKFSS  60
FQALGGHRAS HKRQKLEDGE EELKQQAKSL SLWNNPKMHE CSICGLKFSL GQALGGHMRK  120
HRGLAESSSS SSSSSSSLIN HVIEKTPVLM RSNSKRITCL NLDLNLTPFD PHDDSFANPT  180
PIPLPLSFF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.UJR3L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016208025.11e-137zinc finger protein ZAT11
TrEMBLA0A444YMM11e-136A0A444YMM1_ARAHY; Uncharacterized protein
STRINGAES817423e-64(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.16e-35C2H2 family protein