PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.UL7CP
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 176aa    MW: 20750.3 Da    PI: 10.1517
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.UL7CPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.11.8e-151197191
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 kfY+ Y+k +GFs +++++++    ++i+++  vC++eg+ +++ +    + +t+++   +C a++ v+ +k  g w + k++l+H+H ++p
  Araip.UL7CP 11 KFYKYYSKLAGFSSKIRNTTRD--GDKIKNQLIVCTREGRWKSKISP---TLKTNPSAGLNCPARIYVHIMKdVGLWTIFKVVLNHSHLCCP 97
                 6***************998776..8889************9998777...999******************999**************8875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.9E-121197IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MIFKTLKEAG KFYKYYSKLA GFSSKIRNTT RDGDKIKNQL IVCTREGRWK SKISPTLKTN  60
PSAGLNCPAR IYVHIMKDVG LWTIFKVVLN HSHLCCPDQV EMLKQHRELS MFVPCTVFGS  120
PHLMGSVWFA ELYEDRHLWI PVYLDHHFWA RMRNTQKSES MHSFFNKFIT WNCSLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.UL7CP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016206076.13e-69protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444WXS81e-99A0A444WXS8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G19990.16e-08FAR1-related sequence 1