PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.UNH79
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 195aa    MW: 22661.5 Da    PI: 5.3817
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.UNH79genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.91.2e-2163152190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fY++YA   GF vr ++ k+   +g++++r+ vC++ g+r+e  kk+e+ r +r+ tr  C a+++ ++++  ++w+v ++ +eH+Hel+
  Araip.UNH79  63 RFYKTYAMIHGFAVRLDEVKRD-SDGSVIMRQIVCNRAGSRKEMVKKDERIRDHRPLTRSCCPARIRARLDTkIQQWKVVSFYEEHSHELV 152
                  5****************99887.8999********************9***********************989***************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.4E-1963152IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MYPSDSDFFG SDSDVGFPRG DDLDFLDDDS EADEDRPQDK RIAELSREDI MQLQFTDEEA  60
VYRFYKTYAM IHGFAVRLDE VKRDSDGSVI MRQIVCNRAG SRKEMVKKDE RIRDHRPLTR  120
SCCPARIRAR LDTKIQQWKV VSFYEEHSHE LVAPLDVSMM PEYRTFSVSD KAQAKNLHDI  180
GIRTCHILGY LAAQK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.UNH79
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025628429.11e-138protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445AUB01e-137A0A445AUB0_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1715827
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.11e-14FAR1-related sequence 11