PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.V41PV

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 146aa MW: 17080 Da PI: 10.6246

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.V41PV	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.5	2.4e-14	27	112	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 kfY++Y+k +GFs++++++++ ++i+++ v ++eg+ +++ + + +t+++ +C a++ v+ +k g w ++k++l+H+H++ Araip.V41PV 27 KFYKHYSKLAGFSMKIRNTTRD--GDKIKNQLIVFTREGRWKSKISP---TLKTNPSAGLNCPARIYVHIMKdVGLWTISKVVLNHSHPCY 112 6**************98776..888999999**99998776...999**************999************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.5E-11	27	112	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence Send to blast
MQTSCVVDEK FVPKVGMIFK TLEEVRKFYK HYSKLAGFSM KIRNTTRDGD KIKNQLIVFT 60 REGRWKSKIS PTLKTNPSAG LNCPARIYVH IMKDVGLWTI SKVVLNHSHP CYPDRPEMLK 120 QHRELNMFIR RTIKTNEEAE IRPSKT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.V41PV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016195732.1	3e-92	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444Y3E0	1e-104	A0A444Y3E0_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	3e-10	FAR1 family protein