PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.V76CX
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 283aa    MW: 31634.4 Da    PI: 8.5439
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.V76CXgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.81.3e-29139197259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK+ ++++ pr+Y+rC+ a +Cpvkkkv+rsaed ++++ tYegeHnh 
  Araip.V76CX 139 RDGYQWRKYGQKVTRDNPSPRAYFRCSNApNCPVKKKVQRSAEDRRMLVATYEGEHNHV 197
                  7**************************999****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081126.957133199IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-28133199IPR003657WRKY domain
SuperFamilySSF1182904.84E-25135199IPR003657WRKY domain
SMARTSM007748.6E-34138198IPR003657WRKY domain
PfamPF031061.1E-24140196IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002237Biological Processresponse to molecule of bacterial origin
GO:0002238Biological Processresponse to molecule of fungal origin
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009611Biological Processresponse to wounding
GO:0009623Biological Processresponse to parasitic fungus
GO:0009651Biological Processresponse to salt stress
GO:0009685Biological Processgibberellin metabolic process
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:1990841Molecular Functionpromoter-specific chromatin binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
METTCVDTSL TLNLVSLHKT DVAPEVLVEE LHRLSCENKK LTETLKQVCE NYIALKTKLS  60
QLSSNNMVSS EKEAAVSRTP TRKRKAESES CMSTYSDKCN TPTSTDEETL KRAKHEGSPK  120
VSKIVVRTEA SDTTSLYVRD GYQWRKYGQK VTRDNPSPRA YFRCSNAPNC PVKKKVQRSA  180
EDRRMLVATY EGEHNHVQPQ DSYYSSSLQS DDHYQSPTRV DLVNKSELLE SVGNNNDGGK  240
SSCVRLQPQL LAQQMATSLT KDPNFTAALA TAITGRILSS HFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-22122199174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.V76CX
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1445323e-55BT144532.1 Lotus japonicus clone JCVI-FLLj-16E24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182295.10.0probable WRKY transcription factor 40
RefseqXP_025684257.10.0probable WRKY transcription factor 40
TrEMBLA0A444X6940.0A0A444X694_ARAHY; Uncharacterized protein
STRINGGLYMA06G06530.12e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97334115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-64WRKY DNA-binding protein 40