PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.V8WFA
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 199aa    MW: 19667.5 Da    PI: 4.495
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.V8WFAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.21.5e-0584105223
                  EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                  +Cp C+k+F ++     H+r+H
  Araip.V8WFA  84 TCPVCNKTFASWKGAFGHMRKH 105
                  6********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS00028085105IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048235Biological Processpollen sperm cell differentiation
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
PPVILKTPEE VLAELTESGE SPPPPPPSAA EEGGIGGSAM AIAVGVGGEG VVLGEAGSGG  60
SGAVGASRKR KASEVKDPPT GTPTCPVCNK TFASWKGAFG HMRKHPDRQY RGFFKPPTFT  120
SSVAAAATSG ATTQGSSAAS GEGGSVGAAG QVGEGGSFDL NQPVMERGGA GDGDEGRNGD  180
EGKDLGFDLN KPADEEDKA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.V8WFA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016199015.14e-93collagen alpha-1(I) chain-like
TrEMBLA0A444WUX55e-56A0A444WUX5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102022128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35700.11e-15C2H2 family protein