PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.VCZ4R
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 580aa    MW: 64859.1 Da    PI: 5.0972
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.VCZ4RgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12e-102202601055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  Araip.VCZ4R 220 RKRRERINERLRILQTLVPNG-----TKVDISTMLEEAVHYVKFLQ 260
                  9******************97.....8******************9 PP
2HLH32.12.1e-105065461055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Araip.VCZ4R 506 RRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 546
                  9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.84E-13210269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.907210259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-11215268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-11216265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.23E-11219264No hitNo description
PfamPF000101.1E-7220260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-14494561IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.345496545IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-12501555IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-11502551IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-7506546IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MEPAQLISEE WGSLSGLYTA EEAEFMTQLL AGNYSVSEKH YSSVAMPPSS AFWPCHESTK  60
VSFKGINGNS YLPPSHIENA NYLCFSQGSS SSTENGNIYS YDTTTNFDSM STDNCLEGAK  120
FSPQSNDNSR AQISGIIDED AKIECERMVF EPAEDLENPT KRLRSSSEVP RNMRNVKSRK  180
ENPLPSSYTS NSEEDKGPAA PKNRRSSSGA ATDPQSLYAR KRRERINERL RILQTLVPNG  240
TKVDISTMLE EAVHYVKFLQ LQIKLLSSDD LWIFPRKKME PGEEIYAEWS SLSGSYTAEE  300
ADFMNQFLSN CSHTQQLHAN WNAGIPSALW YGHADINSSS FYAADASNNM FPIIDSDNLN  360
DPLTNLVDPS LSTYTDKELG VDVIADKNVP SEPVSEPAQE NITSKLEKPR KRSRSSNEIL  420
KNKKNVKTTK KPKSASISNI KEEDRCPGQG ENLSCSCSED DLDTCRELNE GESSSLSLKY  480
SKGLQLNGKS RSSRGSATDP QSIYARRRRE RINERLRILQ NLVPNGTKVD ISTMLEEAVQ  540
YVKFLQLQIK LLSSDDLWMY APIAYNGMNI GLDFNITTPK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.VCZ4R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016174491.20.0transcription factor bHLH84-like
RefseqXP_025679561.10.0transcription factor bHLH84-like
SwissprotQ7XHI93e-56BH084_ARATH; Transcription factor bHLH84
TrEMBLA0A4D6N8I11e-169A0A4D6N8I1_VIGUN; Aprataxin
STRINGGLYMA20G26991.12e-95(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-41bHLH family protein