PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.VS41S
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WOX
Protein Properties Length: 242aa    MW: 26207.7 Da    PI: 7.2642
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.VS41SgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox48.31.7e-153696257
                 T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 r+R+t+++eq+ +Le+ F++   +p ++e  ++ k l     + +++V++WFqNrR + ++
  Araip.VS41S 36 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgAVGDANVFYWFQNRRSRSRR 96
                 89*****************99*************************************997 PP
2Wus_type_Homeobox1085.7e-353598265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q
        Araip.VS41S 35 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQ 98
                       589***********************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.4E-91597IPR009057Homeodomain-like
PROSITE profilePS5007111.3213297IPR001356Homeobox domain
SuperFamilySSF466892.95E-1332102IPR009057Homeodomain-like
SMARTSM003893.8E-634101IPR001356Homeobox domain
PfamPF000463.2E-133696IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048830Biological Processadventitious root development
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MEEQGQQHHQ DPNRSHSHGA GGSSSSSEKQ SSEPVRSRWT PKPEQILILE SIFNSGMVNP  60
PKDETVRIRK LLEKFGAVGD ANVFYWFQNR RSRSRRRQRQ IQQQQQQQQH HQHQLGVGVV  120
GVGVGVGGAI QCDQDHPGQP ALSVGSALGF GGSSSFGDSS SCSFHLPPPP TGAGGGSSSS  180
SSFGGEQEAM DNFFSGVPPP HHHTPQMGFQ EIDHTSSLFP HVPPNFTYNS GNSFIHSIAC  240
FS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.VS41S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020960392.11e-166WUSCHEL-related homeobox 11-like isoform X1
RefseqXP_025658268.11e-166WUSCHEL-related homeobox 11 isoform X1
TrEMBLA0A444YQX71e-165A0A444YQX7_ARAHY; Uncharacterized protein
STRINGXP_007151517.17e-42(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58983152
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17810.23e-33WUSCHEL related homeobox 12