PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.W1UKI

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 293aa MW: 33835.3 Da PI: 6.1781

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.W1UKI	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	83.3	2.3e-26	112	162	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k +s +++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl Araip.W1UKI 112 TKMLSRKMISEYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSL 162 7889********************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.552	98	182	IPR003035	RWP-RK domain
Pfam	PF02042	8.0E-21	115	162	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence Send to blast
MFNLYFSGNS NEYPPLECWA HEFSIQDMEC YPSLPFYETL SVEPISTIKD YDFYDIKKGF 60 SVWNEVDAGF DCSEKVVSSS SSLSNNNNEE DKRIRRVMNK RVCREVRSSN STKMLSRKMI 120 SEYFYMPITQ AAKELDVGLT LLKKRCRELG IRRWPHRKLM SLQTLINNVQ ELGKDEGTES 180 EEKLRNAIEI LEKEKKLLEE MPDLQLEDNT KRLRQACFKA NYKKRKLIMG SSSSNSSMES 240 SSSYNIIGHN ATRITSCKGG TMDSIGFISF EDEEDQERDI KSVLSLPPLS HNN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.W1UKI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025628574.1	0.0	protein RKD3
TrEMBL	A0A445AZI4	0.0	A0A445AZI4_ARAHY; Uncharacterized protein
STRING	GLYMA05G01030.2	9e-93	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6184	30	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	3e-50	RWP-RK domain-containing protein