PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.W2FG5
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 522aa    MW: 58287.7 Da    PI: 6.1104
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.W2FG5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.53.6e-30287346159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ +d +++++tYeg+Hnh+
  Araip.W2FG5 287 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCIDDMSILITTYEGTHNHP 346
                  58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-32272348IPR003657WRKY domain
SuperFamilySSF1182901.57E-27281348IPR003657WRKY domain
PROSITE profilePS5081129.011282348IPR003657WRKY domain
SMARTSM007742.7E-37287347IPR003657WRKY domain
PfamPF031062.8E-27288346IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    Send to blast
MSSKGKEPQN MMDIDLSLKI DHHENNKDGE ATPPKVVATV KEDLKNKKKE EIKALNINKE  60
EVPEAAAGEI EDELPSQDNT KARELSVLQM EMESMKEENK VLRKVVEQTM KDYYDLQLKF  120
SIIQENNNNK DKSKDHEISL SLHDHHHREE NATIRKLNDE EGPRRIHHYQ DEMFKFNNKI  180
EKASSLANTD CGDSLISESE LGLSLRLETS TRKKEKEIDD EEDQKQEEEE EEEEEEEEEK  240
KTQPANFASS SAATKLQRTQ HHAFHAASPP NRKARVSVRA RCEAANMNDG CQWRKYGQKI  300
AKGNPCPRAY YRCTVAPGCP VRKQVQRCID DMSILITTYE GTHNHPLPVG ATAMASSAAA  360
SFMLLDSSTF SDHGSFNVNH HQPLLLNPNP NNKGVVLDLI ANEASSSLRF PGMSWMQNNN  420
HNGGAGSFHH QKAAASRGII MEHGEESKAV VDDMVKVSAI ASDPKFRVAV AAAITSFINN  480
NNKDHAIGAT SFAANSSSSS RTTANNWILD NNHNSLSKDA NP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-22274350176WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.W2FG5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016190560.10.0probable WRKY transcription factor 9
RefseqXP_025639642.10.0probable WRKY transcription factor 9
TrEMBLA0A445DMG60.0A0A445DMG6_ARAHY; Uncharacterized protein
STRINGXP_007159029.11e-147(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93203141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.15e-55WRKY DNA-binding protein 9