PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.W6DN5
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 162aa    MW: 18251 Da    PI: 9.2852
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.W6DN5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.51.6e-117811691
         FAR1 16 kskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                  +++k++ ++ ++i+++  vC++eg+ +++ +    + +t+++   +C a++ v+  k  g+w ++k++l+H+H+++p
  Araip.W6DN5  7 EEATKNTtRDGDKIKNQLIVCTREGRWKSKISP---TLKTNPSAGLNCPARIYVHIIKdVGVWTISKVVLNHSHPCCP 81
                 4444444267777888889*******9998776...999*****************9989***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.7E-9581IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MIFETLEEAT KNTTRDGDKI KNQLIVCTRE GRWKSKISPT LKTNPSAGLN CPARIYVHII  60
KDVGVWTISK VVLNHSHPCC PDQAEMLKQH RELSMFVRRT IETYEKAGIR PSKTYQSFMA  120
ADGSHRELAC TVFGSPHLIG SSYKRIGIYG FQFTCITTSG PE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.W6DN5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177749.18e-77uncharacterized protein LOC107620038
TrEMBLA0A444XKW53e-78A0A444XKW5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-07FAR1-related sequence 5