PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.W7PF8
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 161aa    MW: 18728.3 Da    PI: 7.4386
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.W7PF8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.12.1e-1048140285
                  EEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTH.HHHHHHHT--TT-EEEEEE- CS
           B3   2 fkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliy.rkksgryvltkGW.keFvkangLkegDfvvFkld 85 
                  +kvl +sdv++++rl lpk+ ae         +++++e++++ + d + +s+   +   +++s++yv+ ++W k+Fvk   Lk+g  v F+ d
  Araip.W7PF8  48 KKVLNSSDVGSLSRLLLPKEMAEPLvaavlgyDENQKEGMEVEIWDVDTQSMHSLVFKrWGSSRSYVFMANWiKDFVKRRSLKSGHEVGFHWD 140
                  589999****************988*****996677799*******9999998888445*************889***********9999954 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019369.55E-1543148IPR015300DNA-binding pseudobarrel domain
CDDcd100178.92E-1545152No hitNo description
Gene3DG3DSA:2.40.330.104.7E-1447144IPR015300DNA-binding pseudobarrel domain
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MAVDACREQT SSCLERIKKR KREENKKPSF SWGCSTELMM YDDPWKLKKV LNSSDVGSLS  60
RLLLPKEMAE PLVAAVLGYD ENQKEGMEVE IWDVDTQSMH SLVFKRWGSS RSYVFMANWI  120
KDFVKRRSLK SGHEVGFHWD PYANRFDFSV LKAATEEDFS N
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.W7PF8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016173262.21e-117B3 domain-containing protein At2g33720-like
RefseqXP_025677849.11e-117B3 domain-containing protein At2g33720-like
TrEMBLA0A444XPN11e-116A0A444XPN1_ARAHY; Uncharacterized protein
STRINGAES604376e-49(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF5791221
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.11e-21B3 family protein