PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.W94MZ

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bZIP

Protein Properties

Length: 194aa MW: 22774.3 Da PI: 6.1285

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.W94MZ	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	53.3	6.2e-17	91	149	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r+rr+++NRe+ArrsR RK++ ++eL v L +eN+ L+++l++ ++ ++kl +e+ Araip.W94MZ 91 RRQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHNLIDQLNRVSESYEKLLQEN 149 79******************************************************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.4E-18	87	151	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.392	89	152	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.3E-15	91	149	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.97E-13	91	143	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.9E-12	91	159	No hit	No description
CDD	cd14702	8.76E-21	92	142	No hit	No description
PROSITE pattern	PS00036	0	94	109	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0042803	Molecular Function	protein homodimerization activity
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence Send to blast
MVPSEVNNLH NFYLSQENQF LFPPNFTLLQ NDISNINLNT LLTQFPSYYL QHSLGYNSNN 60 SELLVPPSYL SSNSTTSDEA EENQLNIIDE RRQRRMISNR ESARRSRMRK QKHLDELWSQ 120 VVRLRNENHN LIDQLNRVSE SYEKLLQENA CLKEEVSDLR RMFTKLQIAT TTTIFSGGRD 180 EFSNNNSINS RELL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	110	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269\|PubMed:26973252}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00389	DAP	Transfer from AT3G30530	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.W94MZ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016173391.1	1e-138	basic leucine zipper 43-like
Refseq	XP_025630949.1	1e-138	basic leucine zipper 43
Swissprot	Q9FMC2	2e-36	BZP43_ARATH; Basic leucine zipper 43
TrEMBL	A0A445EUP6	1e-134	A0A445EUP6_ARAHY; Uncharacterized protein
STRING	GLYMA02G13960.2	3e-71	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1604	33	99

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	9e-45	basic leucine-zipper 42

Publications ? help Back to Top
Nowak K,Gaj MD Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis. J. Plant Physiol., 2016. 193: p. 119-26 [PMID:26973252] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]