PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.W9PGD
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 125aa    MW: 13760.8 Da    PI: 9.0432
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.W9PGDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.43e-172162447
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +T+eEd+ +++a++++G++ W+tIar +  gRt++ +k++w++ 
      Araip.W9PGD 21 FTPEEDDSIIRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 62
                     9******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.9E-18667IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.2E-22866IPR009057Homeodomain-like
PROSITE profilePS5129420.1821367IPR017930Myb domain
SMARTSM007173.9E-111765IPR001005SANT/Myb domain
PfamPF002491.1E-142062IPR001005SANT/Myb domain
CDDcd001672.55E-122063No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
MLSSLLRWCN QLSPPVEHWA FTPEEDDSII RAHARFGNKW ATIARLLSGR TDNAIKNHWN  60
STLKCKCASM GPIDDPHFVQ PLKRSVSTSA AVPVSTVVVR YSLPTVMVTT EVAGRGPTHP  120
CPSPL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C3e-2076745105C-Myb DNA-Binding Domain
1msf_C3e-2076745105C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.W9PGD
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF2086741e-109KF208674.1 Arachis hypogaea putative MYB-related protein 20 (MYB20) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172696.13e-85transcription factor MYB44-like
RefseqXP_025678181.13e-85transcription factor MYB44-like
SwissprotO231607e-35MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A444YIH92e-74A0A444YIH9_ARAHY; Uncharacterized protein
STRINGXP_004511885.11e-42(Cicer arietinum)
STRINGAES946241e-42(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2082424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-35myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]