PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.WH7IR
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 352aa    MW: 38514.3 Da    PI: 5.9162
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.WH7IRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.91e-33188246159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK vk+s++prsYYrCt++gC vkk+vers++dp++v++tYeg+H+h+
  Araip.WH7IR 188 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTSGCGVKKRVERSSDDPSIVVTTYEGQHTHP 246
                  59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-35173248IPR003657WRKY domain
SuperFamilySSF1182903.66E-30180248IPR003657WRKY domain
PROSITE profilePS5081133.143183248IPR003657WRKY domain
SMARTSM007742.4E-40188247IPR003657WRKY domain
PfamPF031066.6E-28189246IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0042742Biological Processdefense response to bacterium
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MANSVAFSDE IPITNTNTIN TSYPFSSIFD MMPLPLLPSS DHKTSANGFI DLLALHDYTP  60
SLFDWLPAEA TPQQITSSQQ QPLPSPASSN VPDCSEVLNT PASPNSSSIS SSSNEGGAGV  120
GSNNNNAEEH NGGKVVADDE HEAEDEDADG SKENQDKTKK QLKAKKKNQK KQREPRFAFM  180
TKSEVDHLDD GYRWRKYGQK AVKNSPYPRS YYRCTTSGCG VKKRVERSSD DPSIVVTTYE  240
GQHTHPCPAT SRAALAFMHE PSFATIGSSS PHFLLPHQQH FQQPPPPPSL YNSTTTTNPT  300
PPNNASSFGT FVLQDGAFAA ASRLSMDQAF LRDHGLLQDI VPSQIRKEDN IE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-291812491078Probable WRKY transcription factor 4
2lex_A2e-291812491078Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.WH7IR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016198292.20.0probable WRKY transcription factor 48
RefseqXP_025630232.10.0probable WRKY transcription factor 48
TrEMBLA0A445AWC50.0A0A445AWC5_ARAHY; Uncharacterized protein
STRINGXP_007147378.12e-95(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF100234114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.14e-52WRKY DNA-binding protein 48