PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.WQK42

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 106aa MW: 12071.6 Da PI: 7.1833

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.WQK42	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26	3e-08	56	100	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 kfY++Y+k +GFs+r+ +++k+ +ei+++ +Cs egk +++ + Araip.WQK42 56 KFYKNYSKAAGFSTRVWSTNKK--GNEIKNQLITCSIEGKWKSKISP 100 6*************998877..8889**********9988766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.5E-5	56	100	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 106 aa Download sequence Send to blast
MDNSTSDCQL NQSEVDFKFE SNEVHEVYFA ALLCNVDEQF VLKIGMTFNT IENAAKFYKN 60 YSKAAGFSTR VWSTNKKGNE IKNQLITCSI EGKWKSKISP TEKTNP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.WQK42

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020997160.1	3e-45	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444ZBI4	8e-55	A0A444ZBI4_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477