![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Araip.X3UTX | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||
| Family | bZIP | ||||||||
| Protein Properties | Length: 352aa MW: 39546.3 Da PI: 8.8161 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 43.9 | 5.1e-14 | 269 | 317 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53
+r+rr+ kNRe+A rsR+R++a++ eLe + +L++eN+ Lk+ l+e +
Araip.X3UTX 269 RRQRRMLKNRESAARSRARRQAYTVELEAELNVLKEENENLKQILDEAE 317
69****************************************9998866 PP
| |||||||
| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 8.8E-11 | 265 | 331 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 10.783 | 267 | 315 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 4.64E-10 | 269 | 314 | No hit | No description |
| Gene3D | G3DSA:1.20.5.170 | 1.1E-11 | 269 | 316 | No hit | No description |
| Pfam | PF00170 | 7.2E-12 | 269 | 317 | IPR004827 | Basic-leucine zipper domain |
| PROSITE pattern | PS00036 | 0 | 272 | 287 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
| GO:0005634 | Cellular Component | nucleus | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0033613 | Molecular Function | activating transcription factor binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 352 aa Download sequence Send to blast |
MAVSGTKTIS HETLTQELLQ SEAAEPVSKQ NSILSLTLDE IQCKSGKSFG SMSMDEFLAS 60 IWSSEDNNNN NNNNTNQTLH DEQASQHIMK SAGTKTEQQQ QGSFCVIPSP ICKKTVEEVW 120 SEIHKDQEPQ QRDESNNIGM NEALRKQQTL GEMTLEDFLI KAGVVQESKL TSKSRVATTT 180 IMPLVFQNHV SNIASSNRPM DPSYAVRSPM GVGFPSQQNL GNHGTNNNGL GTYPILLQNN 240 NSSTRLLDSS VGSSRKRVID GPPEVVVERR QRRMLKNRES AARSRARRQA YTVELEAELN 300 VLKEENENLK QILDEAELKR KQEVISQRKH TTKAQKRTEK LREIRRTISA AW |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | Araip.X3UTX |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_016169308.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 1 | ||||
| Refseq | XP_025673412.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 1 | ||||
| TrEMBL | A0A444Y779 | 0.0 | A0A444Y779_ARAHY; Uncharacterized protein | ||||
| STRING | AES67058 | 1e-106 | (Medicago truncatula) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF2092 | 33 | 74 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G44460.1 | 3e-54 | bZIP family protein | ||||




