PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.X9JQZ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 492aa    MW: 53267.7 Da    PI: 6.2306
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.X9JQZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.3e-31248306259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Araip.X9JQZ 248 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 306
                  699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.925242308IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.0E-31242308IPR003657WRKY domain
SuperFamilySSF1182903.66E-26245308IPR003657WRKY domain
SMARTSM007741.4E-37247307IPR003657WRKY domain
PfamPF031061.1E-25249306IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MCSSSVRVPM ENNNNNNYKH QGDLTDILRG GPYGGAATAS DEPPSSYHWQ QQLENDTNAC  60
YFGDPFSTMR DPFLHQLHIP PTSSSSYFEE PPLPPPPLPP PPPTLPTPCY NSYGGAHLQH  120
DMRSSSSSSS SSSSSISCNN IFSNMIQISP STNNTSSSCS SSSSSKLAIS SSSSSPPSML  180
SNVNAMVNAT SIPSNKQDCH LLDNASALQI SSPRNPALKR RKNQAKKVVC IPAPAAANSR  240
QTGEVVPSDL WAWRKYGQKP IKGSPYPRGY YRCSSSKGCS ARKQVERSRT DPNMLVITYT  300
SEHNHPWPTQ RNALAGSTRS QPSKNNTNAN IASSKNSETS KVSGNNNKPK EENNNQQHEI  360
GNNNSQGGSG SVVKEEMDHH HSNHDLELEL DNDEEFSDGL SYKPSMIEEG SNNNNQSSED  420
FFADLGEIEA DPLNLLFSSH QGFNAGGGGG GGGDNQRESK ALDPFNLFDN WSSGDTNNNS  480
SSFEEPNNKG RL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B4e-24222309280Disease resistance protein RRS1
5w3x_D4e-24222309280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.X9JQZ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150388e-51AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016197820.10.0probable WRKY transcription factor 35
RefseqXP_025646338.10.0probable WRKY transcription factor 35
TrEMBLA0A444ZE670.0A0A444ZE67_ARAHY; Uncharacterized protein
STRINGXP_007147420.11e-134(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54303454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.14e-69WRKY DNA-binding protein 35