PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.XA1DG
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 196aa    MW: 23162.3 Da    PI: 8.5573
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.XA1DGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY65.31e-20112172259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg +WrKYGqK+ k+ ++ rsYY+C+++   +C++ k+v+r +edp +  +tY g+H+++
  Araip.XA1DG 112 EDGLEWRKYGQKKTKDCRYIRSYYKCSYKneeDCKAIKRVQRIQEDPPLYRTTYYGHHTCK 172
                  7***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081118.177106174IPR003657WRKY domain
SuperFamilySSF1182901.83E-21107172IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.9E-22108172IPR003657WRKY domain
SMARTSM007743.1E-28111173IPR003657WRKY domain
PfamPF031064.3E-21112172IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MENNNSGRKE AIEQELIRGR DVAKELLEVL IIHKSNRNEE EIERSMVMMP FIEDVVRKIL  60
ISFTNTLLLF NSDTQHNRSD EEGNHIHQGC KKSKRPPTLC YKRNIDNAIL SEDGLEWRKY  120
GQKKTKDCRY IRSYYKCSYK NEEDCKAIKR VQRIQEDPPL YRTTYYGHHT CKSSFVNYPH  180
MKLESAPSLE ESSKLL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-14112172969OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00070PBMTransfer from AT5G01900Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.XA1DG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020964061.11e-140probable WRKY transcription factor 62
RefseqXP_025670110.11e-140probable WRKY transcription factor 62
TrEMBLA0A1S3VT925e-52A0A1S3VT92_VIGRR; probable WRKY transcription factor 70
STRINGGLYMA13G34261.12e-50(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126381134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.13e-28WRKY DNA-binding protein 62