PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.XXE31
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 270aa    MW: 29911.2 Da    PI: 10.1431
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.XXE31genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.41.4e-23196250259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr    C+s  gC ++k+vers +dp+++++tY+geH+h 
  Araip.XXE31 196 SDLWAWRKYGQKPIKGSPYPR----CSSCkGCVARKQVERSLSDPTMFVVTYTGEHKHA 250
                  799***************996....98877****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.3E-24182252IPR003657WRKY domain
SuperFamilySSF1182902.48E-20190252IPR003657WRKY domain
PROSITE profilePS5081126.165190252IPR003657WRKY domain
SMARTSM007749.4E-29195251IPR003657WRKY domain
PfamPF031067.0E-18197249IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MSNEEDWDLF AIVRSCKAAN NTAQTPQDTT TKTSSNSIMS TSSTTCLATT TITAEQNDGP  60
FSSNNFVQPR TNGFQELEQL LNTFNPTITT TTTTTSAHGI NSNNPLTFPH FIALPSTLGA  120
STSGFDDRFH HHQQHQQKQH NLLQVQVPQT STTTSLTLLP SSESQSQSQT QTPRSRKRKS  180
QQKRMVCHVT ADNLSSDLWA WRKYGQKPIK GSPYPRCSSC KGCVARKQVE RSLSDPTMFV  240
VTYTGEHKHA KPAHRNSLAG STRKPSTPRQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B9e-13179252279Disease resistance protein RRS1
5w3x_D9e-13179252279Disease resistance protein RRS1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174179SRKRKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.XXE31
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025702148.11e-146probable WRKY transcription factor 27
TrEMBLA0A444YXB01e-144A0A444YXB0_ARAHY; Uncharacterized protein
STRINGGLYMA10G37460.11e-72(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67943249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-41WRKY DNA-binding protein 27