PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.YF64E
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 451aa    MW: 52247 Da    PI: 9.9066
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.YF64EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.43e-1544124191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++Y+k +GFs+rk+++ k+        +  +Cs+egk +++ +    +++t+++t  +C a++ ++  k  g w ++k++l+H+H+++p
  Araip.YF64E  44 KFYKDYSKVAGFSTRKRNEIKN--------QLITCSREGKWKSKISP---TKKTNPSTSLNCPARIYIHVLKdVGIWIISKVVLHHSHPCCP 124
                  6**************9976555........6789*******998877...99*****************98889***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.4E-1244124IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
IRHSGVDQEY LGVFQESLGT FCGVDYQFVP KVGMTFNTLE DAAKFYKDYS KVAGFSTRKR  60
NEIKNQLITC SREGKWKSKI SPTKKTNPST SLNCPARIYI HVLKDVGIWI ISKVVLHHSH  120
PCCPDQAQML KQHRELSMSV RRTIENNEEA SRHIWIPIYL DHHFCAGMRS IQRNESMHSF  180
FKKFITRNSS LIQFVKQYDN CLGSREQKER EFDAADFHTV IPCAKKSSIE AQFQHMYTYQ  240
KFREVQAQFR GKLNIQQVCG YLRLNSSPSE MPVLIIRVKR DIVPSRPKRV KRRHTHIKSS  300
HDEPLLEPRI KRFDELVFHL QNICEFTSES EELTAILHRA YDNVMVEMEE LKAKRKGTCS  360
LSHEDANLES VNELQSLPRV RIRGRPKNRL GSKLDKQIAN ASKKKKTKAL SELNLFDAAS  420
VVQPNSSKYH GHVMNYQFRD PAAGDRCCIL C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1286292PKRVKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.YF64E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-117HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997233.11e-137protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A445CSB70.0A0A445CSB7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-11FAR1 family protein