PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.YI32S
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 96aa    MW: 10823.2 Da    PI: 7.2553
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.YI32SgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.74.2e-095192144
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreee 44
                 kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++
  Araip.YI32S 51 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSK 92
                 6***************998776..8889***********98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.4E-65192IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    Send to blast
MDHSTSDSQL NPGKVDYEFE SNEVLEPLSV VDDELVPKVG MTFTTLEDAG KFYRNYAKAA  60
GFSTRVRCTN RKGNEIKNQL ITCSREGKWK SKISLT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.YI32S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-76HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.18e-59protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997160.13e-59protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997362.18e-59protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YDK65e-63A0A444YDK6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477