PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Z0RAA
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 260aa    MW: 29702.1 Da    PI: 5.1553
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Z0RAAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.81.8e-1780138459
                  SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   4 gynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                   y+ +KYGqK +++ +++r+Y+rCt++   gC+++k+v+r +e p +   tY+g+H+++
  Araip.Z0RAA  80 SYRRKKYGQKAIQNEKYTRNYFRCTHKyeqGCRATKQVQRIQEKPPLYRATYHGRHTCT 138
                  6999**********************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007748.6E-2177139IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.3E-1880138IPR003657WRKY domain
SuperFamilySSF1182901.44E-1780138IPR003657WRKY domain
PROSITE profilePS5081115.67581135IPR003657WRKY domain
PfamPF031065.9E-1781137IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MEDDDIVSRE DGIKAIIEEE LVRGREFADQ LRQLIVINKE DDDSADHQWL LSNHPQIHPC  60
LLTDDNHICK TPPPPDTRGS YRRKKYGQKA IQNEKYTRNY FRCTHKYEQG CRATKQVQRI  120
QEKPPLYRAT YHGRHTCTNT DTTNNHVLIM EELDYPTSSS SSIFLSFDNS FPNPPTNPFL  180
SSSSSSLFPS TAPPLPAMMI VEEDRQVLPS TTSTHPVLDD SSRHHVVPIL SSSENNNICW  240
DDMMMMAAMS QVLYDSVDEG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-16841371568OsWRKY45
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Z0RAA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020971031.11e-150probable WRKY transcription factor 70 isoform X2
RefseqXP_025632060.11e-150WRKY DNA-binding transcription factor 70-like isoform X2
TrEMBLA0A445ADI41e-148A0A445ADI4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2929022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-18WRKY DNA-binding protein 70