PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Z142E
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 360aa    MW: 39285.3 Da    PI: 7.6704
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Z142EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.65.5e-3875132461
       zf-Dof   4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                   alkcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rkn+++
  Araip.Z142E  75 LALKCPRCESTHTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNNTN 132
                  5789**************************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-2564127IPR003851Zinc finger, Dof-type
PfamPF027011.4E-3276131IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.85477131IPR003851Zinc finger, Dof-type
PROSITE patternPS01361079115IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MGFSSLHVCM DSSASDNNWL QGTINEEGST GVDDSSCPSP TGDMMMIACS NKLPTMIIEG  60
SSSRRLMTRP PQDQLALKCP RCESTHTKFC YYNNYSLSQP RYFCKSCRRY WTKGGTLRNI  120
PVGGGCRKNN TNKKSSSNSS KKSSNNNDNN DQPSPLPISV NINNQNQLHY PSNNGGFPDL  180
HQFSSNMNSL FGMSSIGGGL LGNPNFMFEN NPRPLDFMME SGIIKSGSRS FDFLGNSDHH  240
HHMMMNGGGY NLMTSSSSPN YQGLCSSAFG GNNNNMSLDG GNNHNNNNSN NTGSYNIMGS  300
CQRLMLPYDD SGDNGNQNSL IDVKPNPRQL FPLDGKETFG SWTTTGMINS YGSSATNPLV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Z142E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016191067.10.0dof zinc finger protein DOF5.6
RefseqXP_025629077.10.0dof zinc finger protein DOF5.6
TrEMBLA0A445AUB30.0A0A445AUB3_ARAHY; Uncharacterized protein
STRINGXP_007138074.15e-86(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50923456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.18e-41Dof family protein