PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Z5R7T
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 244aa    MW: 28792 Da    PI: 9.2236
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Z5R7TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.65e-12113155447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      WT +E++l++++ ++lG+  W++I+++  k+Rt  q++s+ q++
      Araip.Z5R7T 113 WTLQEHKLFLQGYEELGKQ-WSRISSEYVKTRTYAQVISHSQNF 155
                      *****************99.********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.969105160IPR017930Myb domain
SuperFamilySSF466898.97E-11108161IPR009057Homeodomain-like
SMARTSM007171.8E-6109158IPR001005SANT/Myb domain
TIGRFAMsTIGR015579.1E-10111159IPR006447Myb domain, plants
PfamPF002495.1E-9112154IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.1E-7112151IPR009057Homeodomain-like
CDDcd001679.40E-5113151No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MTDVNAIKNG YPENMMIPSC ACYPLEHSPL SIPIVNATPP LPPPHWTHHH LHRMEAMAAT  60
TDMAVPMQIT LPLSAISGAT REQNRHGNSN IIQHQPLPMA SSDNNKWQQI VHWTLQEHKL  120
FLQGYEELGK QWSRISSEYV KTRTYAQVIS HSQNFFERQE KRARGENLRR KSIHDIIDYR  180
TWFFYYSKNY LICYSKFFEL FNHGSYSILI NVLCKNYNII CVFYWTKENL RKVEETIQAR  240
KIYK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Z5R7T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A445EIG24e-84A0A445EIG2_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.12e-13Homeodomain-like transcriptional regulator