PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Z8QJX
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 222aa    MW: 25138.9 Da    PI: 9.3596
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Z8QJXgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.7e-091865355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 + h ++Er+RR+++  ++ +L   +P +     kK++Ka + ++   YIk Lq
  Araip.Z8QJX 18 ADHIIAERKRRQDLTRSIIQLSATIPGL-----KKMDKAHVIRESLSYIKVLQ 65
                 5699************************.....9****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.44E-71369No hitNo description
SuperFamilySSF474593.27E-141480IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.2621564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-121977IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-71965IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-82170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MSKNDEDATT KKRKGKTADH IIAERKRRQD LTRSIIQLSA TIPGLKKMDK AHVIRESLSY  60
IKVLQDRVKE LENQIKDRRV DSAIFIGRSQ DSSSTDKSTI SYEITSDNNN GGGIYNELSL  120
EIEAKVMEKE VLIRIQCEKQ KNNIIMLKIH AFLDKLHLSI ASNSVLPFGT STLVIITIVA  180
ENKKDSLSLL QLMDNGGKFS MTMDELVKSL REDLMETNNN AW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11127KRKGKTADHIIAERKRR
22328ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Z8QJX
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025649681.21e-147transcription factor NAI1
TrEMBLA0A444ZQT01e-145A0A444ZQT0_ARAHY; Uncharacterized protein
STRINGXP_004492885.17e-52(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF149471112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-37bHLH family protein