PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Z9VQ5
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 188aa    MW: 20040.4 Da    PI: 9.5277
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Z9VQ5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof105.72.6e-331481461
       zf-Dof 14 tntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                 +ntkfCyynnyslsqPryfCkaC+ryWt+GGalrnvPvGgg+rk k++
  Araip.Z9VQ5  1 MNTKFCYYNNYSLSQPRYFCKACKRYWTHGGALRNVPVGGGSRKPKRA 48
                 69******************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088424.642147IPR003851Zinc finger, Dof-type
PfamPF027014.9E-28147IPR003851Zinc finger, Dof-type
ProDomPD0074784.0E-20247IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MNTKFCYYNN YSLSQPRYFC KACKRYWTHG GALRNVPVGG GSRKPKRAKL ATNHSSEATV  60
VGVPAPSSVS SVTPFFQGGV GGFLSSSLGG SGFNNVGSHH FFDQMMIGGA DEQQGFMMNE  120
NRALPLMNPD GSMWSTLMTT TTHINNNNNS SGASSSASAS ADAAALMLNQ WPSTVTRFPP  180
PPPDPSSF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Z9VQ5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179394.11e-138dof zinc finger protein DOF1.1-like
RefseqXP_025680413.11e-138dof zinc finger protein DOF1.1-like
TrEMBLA0A444WYF91e-137A0A444WYF9_ARAHY; Uncharacterized protein
STRINGGLYMA13G31110.15e-26(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2866022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21050.14e-27Dof-type zinc finger domain-containing protein