PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.ZC43U
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NF-X1
Protein Properties Length: 1055aa    MW: 115028 Da    PI: 8.1018
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.ZC43UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X1248.2e-08245263119
     zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                  CG+H+C+++CH G C+pC+
  Araip.ZC43U 245 CGRHRCERICHVGACDPCQ 263
                  ******************6 PP
2zf-NF-X120.11.4e-06309326118
     zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                  CG+H C+++CH+G C++C
  Araip.ZC43U 309 CGNHMCNEICHPGSCGEC 326
                  ****************** PP
3zf-NF-X1171.3e-05367384118
     zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                  CG H C++ CH G+CppC
  Araip.ZC43U 367 CGTHHCKEVCHVGDCPPC 384
                  ****************** PP
4zf-NF-X118.25.6e-06463481119
     zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                  CG+H C++lCH G CppC 
  Araip.ZC43U 463 CGQHACESLCHSGHCPPCL 481
                  ******************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578505.12E-768137No hitNo description
PROSITE profilePS500168.71675136IPR019787Zinc finger, PHD-finger
PROSITE profilePS500899.55378134IPR001841Zinc finger, RING-type
PROSITE patternPS01359078133IPR019786Zinc finger, PHD-type, conserved site
CDDcd060082.10E-5167228No hitNo description
SMARTSM004380.023190208IPR000967Zinc finger, NF-X1-type
PfamPF014227.9192207IPR000967Zinc finger, NF-X1-type
CDDcd060081.98E-11235283No hitNo description
PfamPF014224.1E-6245262IPR000967Zinc finger, NF-X1-type
SMARTSM004381.0E-4245264IPR000967Zinc finger, NF-X1-type
CDDcd060083.20E-8299342No hitNo description
PfamPF014228.5E-4309326IPR000967Zinc finger, NF-X1-type
SMARTSM004389.7E-4309328IPR000967Zinc finger, NF-X1-type
CDDcd060081.30E-12357405No hitNo description
PfamPF014221.9E-4367384IPR000967Zinc finger, NF-X1-type
SMARTSM004382.6E-4367386IPR000967Zinc finger, NF-X1-type
PfamPF0142217425435IPR000967Zinc finger, NF-X1-type
SMARTSM00438170425459IPR000967Zinc finger, NF-X1-type
CDDcd060083.52E-8453496No hitNo description
PfamPF014221.1E-4463480IPR000967Zinc finger, NF-X1-type
SMARTSM004384.1E-4463482IPR000967Zinc finger, NF-X1-type
CDDcd060084.69E-5510558No hitNo description
SMARTSM004382.8520538IPR000967Zinc finger, NF-X1-type
PfamPF0142215528537IPR000967Zinc finger, NF-X1-type
PfamPF014220.6573592IPR000967Zinc finger, NF-X1-type
SMARTSM004384.9573594IPR000967Zinc finger, NF-X1-type
CDDcd060085.44E-5601650No hitNo description
PfamPF014222.6605631IPR000967Zinc finger, NF-X1-type
SMARTSM004380.076612633IPR000967Zinc finger, NF-X1-type
Gene3DG3DSA:3.30.70.3303.1E-6845902IPR012677Nucleotide-binding alpha-beta plait domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0000166Molecular Functionnucleotide binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1055 aa     Download sequence    Send to blast
MSVQAQRDRR SRSRVPPQGG PLVRHNRSNH GAVNQRREVE KGRSSGNQAG KGLKMRDSSL  60
PQLVQEIQEK LMKGTVECMI CYEMVRRSAL VWSCSSCYSI FHLNCIKKWA RAPTSIDLSA  120
EKNQGFNWRC PGCQSVQLTS SKEIRYVCFC GKRVDPPSDL YLTPHSCGEP CGKPLEKEVF  180
SNGGSKEDLC PHVCVLQCHP GPCPPCKAFA PPRLCPCGKK TITTRCFDRQ SVLTCGQRCE  240
KLLECGRHRC ERICHVGACD PCQVLINASC FCSKKVEVLP CGDMTMKGEF TAEAGVFTCG  300
SNCGRKLSCG NHMCNEICHP GSCGECDLLP RRVNTCCCGK TKLDEERKSC LDPIPTCSQV  360
CAKSLPCGTH HCKEVCHVGD CPPCLVLVSQ KCRCGSTSRI VECYKTTAEN EKFTCEKPCG  420
RKKNCGRHRC SERCCLLSNP NNNLSSEWDP HFCSMPCEKK LRCGQHACES LCHSGHCPPC  480
LETIFTDLTC ACGRTSIPPP LPCGTPPPSC QLPCSVPQPC GHIALHSCHF GDCPPCSVPV  540
AKECIGGHVV LRNIPCGSKD IRCNKLCGKT RQCGLHACGR TCHPPPCDNL SCGVQGLPAP  600
CGQTCGAPRR DCRHTCTAPC HPSTPCPDVR CEFPVTITCS CGRITANVPC DAGVSSSNYN  660
ADAVHEASIT QKLPIPLQPV DPNGKKVPLG QRKLMCDDEC AKLERKRVLA DAFDITTPNL  720
DSLHFGDNSV DLISDLYRRD PKWVISVEER CKFLVLGKSR STTHGLKVHV FCPMLKEKRD  780
AVRVIADRWK LAVSAAGWEP KRFIVIHVTS KSKAPTRVLG VKGTPTISAP LPPAFDHLVD  840
MDPRLVVSFP DLPREADISA LVLRFGGECE LVWLNDKNAL AVFHDPARAA TAMRRLDHGT  900
FYQGAVSVVP NVGATTTSST TGAWGAGTMK EGALSVLKGN AWKKAVVQES SWREDSWGDE  960
EWTTGSANVQ QSAWKKEAPI AASFNRWNLL DHESGQSSSS TNVKKAEASG KNTESSAVLR  1020
LESHAAGSNE QGKRGGNLDA TEASEVVDDW EKAYE
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.ZC43U
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025701345.10.0NF-X1-type zinc finger protein NFXL1
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLA0A444Z1F20.0A0A444Z1F2_ARAHY; Uncharacterized protein
STRINGXP_004512772.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF69723145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1