PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.ZCG46
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 197aa    MW: 22540.6 Da    PI: 9.4859
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.ZCG46genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.71.1e-211464155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 ++y+GVr+++ +g+W+AeIrdp   + + +r++lg+f+tae+Aa a+++a++k++g
  Araip.ZCG46 14 PHYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEDAALAYDKAALKFKG 64
                 68********.**********9...3.35************************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.80E-331472No hitNo description
PfamPF008472.5E-151464IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-341573IPR001471AP2/ERF domain
SMARTSM003801.8E-381578IPR001471AP2/ERF domain
PROSITE profilePS5103224.7241572IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-231573IPR016177DNA-binding domain
PRINTSPR003674.9E-121627IPR001471AP2/ERF domain
PRINTSPR003674.9E-123854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MTNNKEEGSN KKKPHYRGVR QRPWGKWAAE IRDPNKAARV WLGTFDTAED AALAYDKAAL  60
KFKGNKAKLN FPQKLVQPNT TQQQQPNNNN MLQQQQLQGG SAFQFSGSAS NAILPTLYSP  120
SSSLSSTHDH QVFPNLFQYA QILSSDEANF PYYTSHLFNQ QQQQQQQQLQ QSLNPSSYFY  180
NQQQQHDHEG GHHHHQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-281275266ATERF1
3gcc_A3e-281275266ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.ZCG46
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016194567.11e-139ethylene-responsive transcription factor ERF113
RefseqXP_025650275.11e-139ethylene-responsive transcription factor ERF113-like
RefseqXP_025697000.11e-139ethylene-responsive transcription factor ERF113-like
TrEMBLA0A444WP771e-137A0A444WP77_ARAHY; Uncharacterized protein
STRINGAES778484e-61(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.12e-26ERF family protein