PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.ZJW3N

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 386aa MW: 44473.3 Da PI: 6.6157

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.ZJW3N	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.5	4.4e-08	60	103	1	41
FAR1 1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkr 41 +fYneY++ GFsvr+sk +s +ge+ ++ fvCs++g++ Araip.ZJW3N 60 DFYNEYGRIKGFSVRRSKVGQSmkvGSEGEMLWQIFVCSRQGEE 103 6*************99888866678999**********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.1E-5	60	104	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence Send to blast
MTELAIEGEG GAEGSYAVSS NFGRALKAWV ITSETMFAED DGIESGEEEE IDIDLQMTYD 60 FYNEYGRIKG FSVRRSKVGQ SMKVGSEGEM LWQIFVCSRQ GEEFIEHFQH YLEFMRRRDL 120 VADYKSAYSE PLVKTKLEVL ERYAATIYTK EVFLLFREVL LFSSNVRVVS RKKTTSCTLF 180 EVTMYCQQRC WNVAWAKTEE EFTCSCLHIE SFGIPCVYIV GVLVYLNITI IPAMLILERW 240 TKRAKQPTLN TVTRVGEIPD AAYMSMHAAM FDDCRDLIRL SCRHFEYYFE LKTRIANERA 300 ALREKHRLRA GTVDVEVCLL MAAGMLQRPP QIGKTWMWSR RRTTCLKQMM LMNLTYKGNF 360 SVSFSEDAAY SVVTPGQLAL SCMSHS

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence Send to blast

MTELAIEGEG GAEGSYAVSS NFGRALKAWV ITSETMFAED DGIESGEEEE IDIDLQMTYD  60
FYNEYGRIKG FSVRRSKVGQ SMKVGSEGEM LWQIFVCSRQ GEEFIEHFQH YLEFMRRRDL  120
VADYKSAYSE PLVKTKLEVL ERYAATIYTK EVFLLFREVL LFSSNVRVVS RKKTTSCTLF  180
EVTMYCQQRC WNVAWAKTEE EFTCSCLHIE SFGIPCVYIV GVLVYLNITI IPAMLILERW  240
TKRAKQPTLN TVTRVGEIPD AAYMSMHAAM FDDCRDLIRL SCRHFEYYFE LKTRIANERA  300
ALREKHRLRA GTVDVEVCLL MAAGMLQRPP QIGKTWMWSR RRTTCLKQMM LMNLTYKGNF  360
SVSFSEDAAY SVVTPGQLAL SCMSHS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.ZJW3N

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025681319.1	1e-156	uncharacterized protein LOC112782882
Refseq	XP_029152078.1	1e-156	uncharacterized protein LOC112782882
Refseq	XP_029152079.1	1e-156	uncharacterized protein LOC112782882
Refseq	XP_029152080.1	1e-156	uncharacterized protein LOC112782882
Refseq	XP_029152081.1	1e-156	uncharacterized protein LOC112782882
TrEMBL	A0A444X3J3	0.0	A0A444X3J3_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13819	2	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-09	FAR1-related sequence 5