PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.ZKZ5I
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 353aa    MW: 41301.9 Da    PI: 9.4167
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.ZKZ5IgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.52.2e-081883171
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkke 71
                 kfY++Y+k + Fs+++++++++   ++i+++   Cs+e k +++ +    + +t+++  ++C ak+ v+  
  Araip.ZKZ5I 18 KFYKNYSKLASFSTKIKNTTQK--GDKIKNQLIICSREEKWKPKISP---TLKTNPSAGINCPAKIYVHIL 83
                 6***************987766..7889**************99877...999*************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.4E-51882IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MNNLSQRRTF GTLEEARKFY KNYSKLASFS TKIKNTTQKG DKIKNQLIIC SREEKWKPKI  60
SPTLKTNPSA GINCPAKIYV HILKDVDNFQ SCSESFTPLL YRPDRDAQTT QGAKHIPVYL  120
DHHFWYRMRS TQRSESMHTF FNKFITRNIS LSQFVKQYDN CLASREQSER EFDVVDFHTM  180
IPCALKSTIE AQFQHVYTPE KFREVQGQFR GKMNCITRSV NSTLGFTTYE IVEQVSNSTF  240
DKFFVTYDAV SREVKCQCLL FKSRGILCCH SLNNIAPKYI LESWSKYIKR RYTYIKSSQD  300
EPLLEPRSKR FDNLLNLLDG GSTIQSSSSL YNAPDMNYPR EDYRSFSVSE TEY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.ZKZ5I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020968430.11e-113protein FAR1-RELATED SEQUENCE 1-like isoform X1
TrEMBLA0A445ET061e-143A0A445ET06_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.22e-22far-red elongated hypocotyls 3