PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

BGIOSGA000815-PA

Common Name

OsI_03763

Organism

Oryza sativa subsp. indica

Taxonomic ID

39946

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

VOZ

Protein Properties

Length: 542aa MW: 60487.2 Da PI: 4.7525

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
BGIOSGA000815-PA	genome	RIS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	429	7e-132	243	460	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 p p+afl+pkcalwdc+rpaqgse++qdycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaals+k+qgk+vgip+cegaatakspwna BGIOSGA000815-PA 243 PVPAAFLRPKCALWDCPRPAQGSERWQDYCSMYHADLAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSSKIQGKHVGIPVCEGAATAKSPWNA 335 89***********************************9879********************************************** PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrl 185 +elfdl ++ege+irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqps+s+ewhlyeyein++da+alyrl BGIOSGA000815-PA 336 PELFDLYIFEGESIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSNSYEWHLYEYEINDCDAFALYRL 428 ***************************************************************************************** PP VOZ 186 elklvdekksakgkvskdsladlqkklgrlta 217 e+k++d+kk+ak+k+++++l+++q++++rl+a BGIOSGA000815-PA 429 EFKSSDAKKTAKSKLACNPLNEIQQQMVRLSA 460 ****************************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence Send to blast
MGRGPAAGRS SAQGNNRELS DPPSETLRLL QLAAAEEEED DATSKLVEQQ QQHPPSANQA 60 HGHPQAQGGQ DMKPEPPEEA VASPADLTVP QQPQSPGQGV LASGGGMLAP AAAAVFHDQL 120 MISSNADWVK ELHGWRELLE VCEVEKEHEH GTCCGWDGTK QMYYVNQELT VEDFLYDDNY 180 KMYLPGYNSD ILNNLESTGQ LEYPQFNLPQ ELPPNAYLDT SNCGQNAGDV FLHMSDLLNT 240 MSPVPAAFLR PKCALWDCPR PAQGSERWQD YCSMYHADLA VKEEGPPGTM PVIRPRGIDL 300 KDGPLFAALS SKIQGKHVGI PVCEGAATAK SPWNAPELFD LYIFEGESIR EWLFFDKPRR 360 AFESGNRKQR SLPDYNGRGW HESRKQVMKD FGGLKRSYYM DPQPSNSYEW HLYEYEINDC 420 DAFALYRLEF KSSDAKKTAK SKLACNPLNE IQQQMVRLSA DSPVENKRSA RSRTKANPND 480 INSNIYLVQN TTVQGSIPNA YQAVSQPDQM TYLNGNVVYG PHLPYGYSTE RSDFYWSSND 540 GA

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence Send to blast

MGRGPAAGRS SAQGNNRELS DPPSETLRLL QLAAAEEEED DATSKLVEQQ QQHPPSANQA  60
HGHPQAQGGQ DMKPEPPEEA VASPADLTVP QQPQSPGQGV LASGGGMLAP AAAAVFHDQL  120
MISSNADWVK ELHGWRELLE VCEVEKEHEH GTCCGWDGTK QMYYVNQELT VEDFLYDDNY  180
KMYLPGYNSD ILNNLESTGQ LEYPQFNLPQ ELPPNAYLDT SNCGQNAGDV FLHMSDLLNT  240
MSPVPAAFLR PKCALWDCPR PAQGSERWQD YCSMYHADLA VKEEGPPGTM PVIRPRGIDL  300
KDGPLFAALS SKIQGKHVGI PVCEGAATAK SPWNAPELFD LYIFEGESIR EWLFFDKPRR  360
AFESGNRKQR SLPDYNGRGW HESRKQVMKD FGGLKRSYYM DPQPSNSYEW HLYEYEINDC  420
DAFALYRLEF KSSDAKKTAK SKLACNPLNE IQQQMVRLSA DSPVENKRSA RSRTKANPND  480
INSNIYLVQN TTVQGSIPNA YQAVSQPDQM TYLNGNVVYG PHLPYGYSTE RSDFYWSSND  540
GA

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Os.18072	0.0	callus\| leaf\| panicle\| root\| seed\| stem

Expression -- Microarray ? help Back to Top
Source	ID	E-value
GEO	297597629	0.0

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK241765	0.0	AK241765.1 Oryza sativa Japonica Group cDNA, clone: J065205E23, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015621735.1	0.0	transcription factor VOZ1
Swissprot	Q9SGQ0	1e-123	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B8A9T9	0.0	B8A9T9_ORYSI; Uncharacterized protein
STRING	OGLUM01G35310.1	0.0	(Oryza glumipatula)
STRING	ORUFI01G34290.1	0.0	(Oryza rufipogon)
STRING	ONIVA01G35590.1	0.0	(Oryza nivara)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-118	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]