PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA003383-PA
Common NameOsI_01629
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family G2-like
Protein Properties Length: 346aa    MW: 38401.6 Da    PI: 9.9586
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA003383-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like27.66.4e-09180242155
           G2-like   1 kprlrWtpeLHerFveaveqL..GGsekAtPktilelmkv.......kgLtlehvkSHLQkYRl 55 
                       k+r  WtpeL + F+e  e+L   G++  +P +ilelmk+       + Lt++ v S LQkY+ 
  BGIOSGA003383-PA 180 KKRFIWTPELSKIFIEIYEELllTGIN-PVPTKILELMKLrigpmndPELTRNTVSSYLQKYKA 242
                       6899**************985336776.8********976333333368*************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.2E-13177245IPR009057Homeodomain-like
SuperFamilySSF466894.3E-6178243IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MSSGAPPHAG SGGPPPPAVL ALPHGMVVVG DEAVQRAVVL RLGVNFRATV CSEINAAVEM  60
LRERTKEFDF AVISEESIRS LRPEIMKFLG EETGLRLLVL RNEGGNEYSV VPVVRRSDTV  120
CIEVSHASSA RLPAASPHDG SNGSTAAAAA AVASSVRRAT NGRKHRRRAG EKSSQHRQRK  180
KRFIWTPELS KIFIEIYEEL LLTGINPVPT KILELMKLRI GPMNDPELTR NTVSSYLQKY  240
KAYLLKQEQK DQQLPIDDNT NTSSIKSQQG SASLQQQIMN YGENDSMDNQ SIILSQTRYN  300
EHSNKQPKLL TANYHGPRNM HHHHKNTNMQ PSNVLLDQSK GIQYVL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165181RRRAGEKSSQHRQRKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126091e-180CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8A7310.0B8A731_ORYSI; Uncharacterized protein
STRINGOBART01G13420.10.0(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1378244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.11e-08G2-like family protein