PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA004628-PA
Common NameOsI_04102
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 163aa    MW: 18271.8 Da    PI: 7.4573
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA004628-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.5e-11958150
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                      e+el+++r+   NReA r++R++Kka  + Lee+vk+L + N++L  +l+
  BGIOSGA004628-PA  9 EEELRKTRKPLGNREAVRKYREKKKAHAAFLEEEVKKLRTTNQQLLRRLQ 58
                      789******************************************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-14977No hitNo description
SMARTSM003386.8E-12976IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.9791158IPR004827Basic-leucine zipper domain
PfamPF077163.7E-121158IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.23E-91259No hitNo description
CDDcd146864.32E-101467No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MASGENNIEE ELRKTRKPLG NREAVRKYRE KKKAHAAFLE EEVKKLRTTN QQLLRRLQGH  60
ISLEAEVVRL RALLFDIRGK IDAEIGTFPF QKQCSFGSVT CTDHSPCFNT STEVAVREES  120
SRPTIVDCGI DGTGIISHEL DIPKMVNSVD VIPSFVNSAS LTE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.148259e-61stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126090.0CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015618027.11e-116basic leucine zipper 23
RefseqXP_015618034.11e-116basic leucine zipper 23
TrEMBLA0A0E0FUI61e-116A0A0E0FUI6_ORYNI; Uncharacterized protein
TrEMBLA2WW231e-116A2WW23_ORYSI; Uncharacterized protein
STRINGONIVA01G38950.11e-117(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38313675
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.16e-26bZIP family protein