PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA006975-PA
Common NameOsI_06191
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 170aa    MW: 19308.6 Da    PI: 5.9483
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA006975-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.41.3e-1274121552
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                       ++ rr+ +NRe+ArrsR RK+ +++eL   v eL   N++L  el+++
  BGIOSGA006975-PA  74 RKKRRLVSNRESARRSRVRKQRRLDELSSQVSELRDTNQRLLVELNHM 121
                       78899************************************9777654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.5E-1067121No hitNo description
SMARTSM003383.8E-970134IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.16272135IPR004827Basic-leucine zipper domain
PfamPF001702.4E-974120IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.21E-1074124No hitNo description
PROSITE patternPS0003607792IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MQHDAISNIA YHPSMDFTSF FLPQTDAYSH DLSALLDMAV VDPYISCNGS SITMIPVTED  60
EANAQPMNHG NDERKKRRLV SNRESARRSR VRKQRRLDEL SSQVSELRDT NQRLLVELNH  120
MISKHSRIVR ENSQLREEAS DLQRKLSEME MEDAEVAAAA AAAPRTLEVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18692RRSRVRK
28693RRSRVRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.583770.0panicle
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126100.0CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
GenBankCT8353620.0CT835362.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI022L05, full insert sequence.
GenBankCT8353650.0CT835365.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI025K13, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015624742.11e-121basic leucine zipper 43
TrEMBLA0A0E0G3591e-121A0A0E0G359_ORYNI; Uncharacterized protein
TrEMBLA2X1W51e-121A2X1W5_ORYSI; Uncharacterized protein
STRINGONIVA02G08570.11e-121(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127422735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-11basic leucine-zipper 42