PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA013866-PA
Common NameOsI_14164
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 286aa    MW: 30978.1 Da    PI: 4.2331
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA013866-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.82.7e-2091541128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkya..tgkrknratk.....s 80 
                       l pGf FhP+d+ l++ +L++++++ ++e  + i+++d+y+++P +L         ++++++ wyfF++ + +++  t+ r++ra+      +
  BGIOSGA013866-PA   9 LEPGFVFHPSDDGLITLFLRPSIAKIPFED-RLINHADVYSADPAELVGehrpapGTHGSSSVWYFFCSPRFTSKrkTSGRRQRAVGgggggE 100
                       579************************998.88**************7335666655557779*****9875544115567777654444447 PP

               NAM  81 gyWkatgkdkevlskkgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                       ++W++ g +k+v+ ++g+ vg  + + +       +g+a++ ++  W+m ey l
  BGIOSGA013866-PA 101 SVWRSEGGKKAVIGADGRRVGYLQKFSYGvyesssSGSARTFTRLGWCMTEYGL 154
                       78********************99999966677766889999999*******76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.59E-307159IPR003441NAC domain
PROSITE profilePS5100523.9549170IPR003441NAC domain
PfamPF023653.7E-1211153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MADDDEIALE PGFVFHPSDD GLITLFLRPS IAKIPFEDRL INHADVYSAD PAELVGEHRP  60
APGTHGSSSV WYFFCSPRFT SKRKTSGRRQ RAVGGGGGGE SVWRSEGGKK AVIGADGRRV  120
GYLQKFSYGV YESSSSGSAR TFTRLGWCMT EYGLDDDAID GADKQRKADD GADHPEAPPS  180
ARPRQEEAGS EHGEQPAILP ELDLDALLSA PMDDSLGVEF DTATTEQYMR YLMNDEPLPW  240
APTMEVAGGG DEFIETTNGP CMGEEEIIQR LAAGETLDDI LGSNPN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126110.0CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015629669.10.0NAC domain-containing protein 71-like
RefseqXP_015629670.10.0NAC domain-containing protein 71-like
TrEMBLB8AMQ70.0B8AMQ7_ORYSI; Uncharacterized protein
STRINGORGLA03G0364100.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43632158
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.11e-09NAC domain containing protein 80