PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA020889-PA
Common NameOsI_23699
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 159aa    MW: 17884.3 Da    PI: 10.1602
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA020889-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.55.8e-1396124533
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                       k  rr+++NReAAr+sR+RKka+i++Le+
  BGIOSGA020889-PA  96 KTLRRLAQNREAARKSRLRKKAYIQQLET 124
                       7789***********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.3E-1090137No hitNo description
SMARTSM003381.0E-592152IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.56594123IPR004827Basic-leucine zipper domain
PfamPF001705.2E-1096124IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.44E-896127No hitNo description
PROSITE patternPS00036099114IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MCKCRRRNPE GYDMPSDLDQ ALLLYFDGQE QDKPSTQEEP HKPLNFVKET LNIFPSQPMD  60
GEPTPTPKKE GGSGSGGAMA ASASSELKGP KTPDPKTLRR LAQNREAARK SRLRKKAYIQ  120
QLETGRIRLA HLEQEIQFTR AQGAFSRCWN SKPRLTLSN
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.501211e-140stem
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1199091e-138AK119909.1 Oryza sativa Japonica Group cDNA clone:002-183-A10, full insert sequence.
GenBankCT8331051e-138CT833105.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA207O13, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015643999.18e-76transcription factor TGAL8 isoform X1
SwissprotQ69T212e-76TGAL8_ORYSJ; Transcription factor TGAL8
TrEMBLB8B4L71e-114B8B4L7_ORYSI; Uncharacterized protein
STRINGOBART06G21000.22e-75(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129722126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.25e-35bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]