PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

BGIOSGA023314-PA

Common Name

OsI_23804

Organism

Oryza sativa subsp. indica

Taxonomic ID

39946

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bZIP

Protein Properties

Length: 172aa MW: 18011.7 Da PI: 8.5263

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
BGIOSGA023314-PA	genome	RIS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.5	2.5e-12	69	129	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + ++err+++NRe+ArrsR R++ +++eL v+eL a N++L+ el++ a++ e+ BGIOSGA023314-PA 69 DERKERRLASNRESARRSRVRRRRQLDELSSHVAELRAANHRLAVELNRAAARHAQMAREN 129 6689********************************************9998888887765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.5E-7	67	131	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.5E-8	67	117	No hit	No description
PROSITE profile	PS50217	10.622	69	132	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.5E-9	70	129	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.04E-7	71	119	No hit	No description
PROSITE pattern	PS00036	0	74	89	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence Send to blast
MAYQSFGAVD LAASFFFFSS SSSSPQPGLV GVHGDRFLGG GGGDGGDGGS SYDGGGDGGA 60 ASGKGTRRDE RKERRLASNR ESARRSRVRR RRQLDELSSH VAELRAANHR LAVELNRAAA 120 RHAQMARENA RLAEEARALR ERLPLRGGGG DGEAEEEAGG GCGAEAILAP MD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	CP012614	0.0	CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A2YFB5	1e-113	A2YFB5_ORYSI; Uncharacterized protein
STRING	ONIVA06G25700.1	4e-53	(Oryza nivara)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP20480	8	8