PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA029545-PA
Common NameOsI_31850
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family EIL
Protein Properties Length: 610aa    MW: 68271.8 Da    PI: 5.9528
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA029545-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3436.82e-133384191353
                       XXXXXXXXXXXXXXXXXXXXXXX...XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
              EIN3   1 eelkkrmwkdqmllkrlkerkkqll.edkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLr 92 
                       e+l +rmwkd+++l+r+ker+ +l  + ++a+++++k + +++qa rkkmsraQDgiLkYMlk mevcna+GfvYgiip+kgkp++gasd++r
  BGIOSGA029545-PA  38 EDLARRMWKDRIKLRRIKERQDRLAlALQQAELDKSKGKPISDQAMRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPMSGASDNIR 130
                       89*******************99651556666************************************************************* PP

                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT CS
              EIN3  93 aWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg 185
                       aWWkekv+fd+ngpaai+ky+++nl+++++ s+   + +++hsl++lqD+tlgSLLs+lmqhcdppqr++plekg++pPWWP+G+e+ww +lg
  BGIOSGA029545-PA 131 AWWKEKVKFDKNGPAAIAKYESENLASADAPSS---GIKSQHSLMDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPSGNEDWWIALG 220
                       **************************9988888...88******************************************************* PP

                       --TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.....XXXXXXXX CS
              EIN3 186 lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.....slrkqspk 273
                       l++ q  ppykkphdlkk+wkv+vLt vikhmsp++++ir+++r+sk+lqdkm+akes ++l vl++ee+++ ++   +s        + ++ 
  BGIOSGA029545-PA 221 LPRGQI-PPYKKPHDLKKVWKVGVLTGVIKHMSPNFDKIRNHVRKSKCLQDKMTAKESLIWLGVLQREERLVLSIDNGMSevthhGALEYRNG 312
                       *****9.9****************************************************************999888554555433448899 PP

                       XXXXXXXXXXXXXXXXXX.XXXXXXXXXX................................XXXXXXXXXXXXXXXXXXXXX......XXXXX CS
              EIN3 274 vtlsceqkedvegkkeskikhvqavktta................................gfpvvrkrkkkpsesakvsskevsrtcqssqf 334
                        t+s+++++dv+g +e   ++++ +++++                                g++   krk+++++ + ++ +ev    q++  
  BGIOSGA029545-PA 313 DTHSSSNEYDVDGFEEAPLSTSSRDDEQDlspaaqlseehaptrrerakvkrpnqvvpkkaGTKEPPKRKRPRHSVTVIE-QEV----QRADD 400
                       99999*******999999899999999889***************************************96666666655.545....77777 PP

                       XX.XXXXXXXXXXXXXXXX CS
              EIN3 335 rgsetelifadknsisqne 353
                        +++++++++d+n+++q e
  BGIOSGA029545-PA 401 ASEHSRNMIPDMNRLDQVE 419
                       778899*******999865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.0E-12538288No hitNo description
Gene3DG3DSA:1.10.3180.107.8E-70162294IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.06E-60168291IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    Send to blast
MDHLAIIATE LGDSSDFEVE GIQNLTENDV SDEEIEAEDL ARRMWKDRIK LRRIKERQDR  60
LALALQQAEL DKSKGKPISD QAMRKKMSRA QDGILKYMLK LMEVCNARGF VYGIIPDKGK  120
PMSGASDNIR AWWKEKVKFD KNGPAAIAKY ESENLASADA PSSGIKSQHS LMDLQDATLG  180
SLLSSLMQHC DPPQRKYPLE KGTPPPWWPS GNEDWWIALG LPRGQIPPYK KPHDLKKVWK  240
VGVLTGVIKH MSPNFDKIRN HVRKSKCLQD KMTAKESLIW LGVLQREERL VLSIDNGMSE  300
VTHHGALEYR NGDTHSSSNE YDVDGFEEAP LSTSSRDDEQ DLSPAAQLSE EHAPTRRERA  360
KVKRPNQVVP KKAGTKEPPK RKRPRHSVTV IEQEVQRADD ASEHSRNMIP DMNRLDQVEI  420
QGMANQITSF NEEANTSEAL QHRGNTQELA HLPADFNHYG NAQATIATPV SICMRGQAVP  480
YESSDNSRPK TGNIFPQDSD SGFNNMPSSY QTIPPKQPLP LSIMEHHVVP LGIRTPANSP  540
YSDQIIGSGN STSVPGDMQL IDYPFYGEQD KFAGSSFAGL PLDYISISSP IPDIDDLLLH  600
DDDLMEYLGT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-661682919132ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.878710.0callus| flower| leaf| panicle| root| seed| stem
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329759970.0
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00649PBMTransfer from LOC_Os09g31400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126170.0CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015612094.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_015612095.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-145EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA2Z2L00.0A2Z2L0_ORYSI; Uncharacterized protein
STRINGORUFI09G15900.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-147ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]