PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

BGIOSGA031176-PA

Common Name

OsI_32216

Organism

Oryza sativa subsp. indica

Taxonomic ID

39946

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bZIP

Protein Properties

Length: 206aa MW: 22343.2 Da PI: 10.1822

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
BGIOSGA031176-PA	genome	RIS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	53.3	6.1e-17	122	168	4	50
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++r rr++kNRe+A rsR+RK+a++ +Le++v++L++eNk+L+ + e BGIOSGA031176-PA 122 DRRKRRMIKNRESAARSRARKQARVNNLETEVEQLKQENKMLRVKYE 168 789***************************************97655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.9E-12	119	189	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.151	121	169	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.9E-15	121	169	No hit	No description
Pfam	PF00170	9.6E-15	122	169	IPR004827	Basic-leucine zipper domain
CDD	cd14707	4.74E-20	123	175	No hit	No description
SuperFamily	SSF57959	1.13E-11	123	169	No hit	No description
PROSITE pattern	PS00036	0	126	141	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence Send to blast
MEDDEDMWAN TSSPSASPPR PRGFISTALS LNSTHLQGLL PSSFVDAAAS PCHASGNNNG 60 GGDGRNAAQM SSIFSASASY HQQQHHLPAP APLDGAILPA RRFGLDMCAT AAAPAGVPAA 120 GDRRKRRMIK NRESAARSRA RKQARVNNLE TEVEQLKQEN KMLRVKYEQG HSGQWLEKPS 180 LARFSQMSIF VCPRSGYVAT LERVLM

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Os.83225	0.0	panicle

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	CP012617	0.0	CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015611345.1	2e-85	uncharacterized protein LOC9271661
TrEMBL	A2Z3L0	1e-151	A2Z3L0_ORYSI; Uncharacterized protein
STRING	ONIVA09G19210.1	1e-120	(Oryza nivara)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9764	30	44