PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA034827-PA
Common NameOsI_35163
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 175aa    MW: 18762.3 Da    PI: 8.495
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA034827-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.8e-1197159163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kke +   +e+ +lk  +
  BGIOSGA034827-PA  97 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNETMKKEKDVVMQEYLSLKETN 159
                       89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-1297161IPR004827Basic-leucine zipper domain
PfamPF001702.1E-997159IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.97999162IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-5101165No hitNo description
SuperFamilySSF579592.38E-7101155No hitNo description
CDDcd147022.57E-11102152No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MALADMPGAA PGQPEASPPP HATQEAAAAA VAKGEQEDEA EMASTRLSLE LGKVGIQSSS  60
PCSSSSSAGH PAMQPAAAAT AAPGYGPRPR HMLTEAEKEA KRLRRVLANR ESARQTILRR  120
QAIRDELARK VADLSSQNET MKKEKDVVMQ EYLSLKETNK QLKEQAQLHL SLSLI
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1567645200.0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2879050.0AK287905.1 Oryza sativa Japonica Group cDNA, clone: J065211O07, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615785.15e-79uncharacterized protein LOC4349815
TrEMBLB8BJ591e-121B8BJ59_ORYSI; Uncharacterized protein
STRINGOBART11G03540.12e-93(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.14e-18bZIP family protein