PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA035288-PA
Common NameOsI_36153
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 160aa    MW: 16795.2 Da    PI: 10.0983
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA035288-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY37.35.3e-12136158123
                       ---SS-EEEEEEE--TT-SS-EE CS
              WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                       ldDgy+WrKYGqK vk+++fpr+
  BGIOSGA035288-PA 136 LDDGYRWRKYGQKAVKNNKFPRQ 158
                       59*******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-13121158IPR003657WRKY domain
SuperFamilySSF1182905.75E-10128157IPR003657WRKY domain
PROSITE profilePS5081113.104131160IPR003657WRKY domain
SMARTSM007740.0026136160IPR003657WRKY domain
PfamPF031066.3E-8137158IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MENFPILFAT QPTSSSTSSS YHFMSSSSGS HDHRHHHGLQ AGGNGGGGGG SLSHGLFMGS  60
SSSSIRMEEL SNSKQAGDVV VDGGATRSPH GGDGDGAAGD DGGDAQAAAA GGRKKGEKKE  120
RRPRFAFQTR SQVDILDDGY RWRKYGQKAV KNNKFPRQAN
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.558273e-51leaf| root
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1367870.0AC136787.4 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBa0052B22, complete sequence.
GenBankAK1088600.0AK108860.1 Oryza sativa Japonica Group cDNA clone:002-152-B08, full insert sequence.
GenBankAP0149670.0AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence.
GenBankHQ8588510.0HQ858851.1 Oryza sativa Japonica Group isolate UT1614 WRKY transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615223.11e-110probable WRKY transcription factor 56
TrEMBLB8BKK51e-111B8BKK5_ORYSI; Uncharacterized protein
STRINGOS11T0490900-011e-110(Oryza sativa)
STRINGONIVA11G13150.11e-110(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP110038133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.17e-19WRKY DNA-binding protein 75