PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA037021-PA
Common NameOsI_37530
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 194aa    MW: 21103.8 Da    PI: 6.9499
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA037021-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-10116178163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kke e+  +e+ +lk  +
  BGIOSGA037021-PA 116 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSTQNESMKKERETVMQEYLSLKETN 178
                       89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-6113181No hitNo description
SMARTSM003381.9E-12116180IPR004827Basic-leucine zipper domain
PfamPF001707.7E-10116179IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.14118181IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-7120176No hitNo description
CDDcd147026.75E-11121171No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MSDDHSGGGG EQRQCRRGFA VDVVELGAAL ALADMAGAAV KPAMQLQLQP TAAQEEDEEM  60
ATTRLSLQLG NNVGSIIQSS SCSSSGSSAG LPAPPPPPPP ATAYGTKPLH MLTEEEKEAK  120
RLRRVLANRE SARQTILRRQ AIRDELARKV ADLSTQNESM KKERETVMQE YLSLKETNKQ  180
LKEQAQHHLS LSLF
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.22350.0callus
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO334658900.0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankOSU042970.0U04297.1 Oryza sativa Nipponbare bZIP DNA-binding factor (osZIP-2b) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025877668.11e-103uncharacterized protein LOC4351546
TrEMBLB8BN971e-138B8BN97_ORYSI; Uncharacterized protein
STRINGOGLUM12G04120.11e-137(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.18e-16bZIP family protein